Loss of heterozygosity does not occur in BRCA1/2 mutant pediatric solid and central nervous system tumors

Pediatr Blood Cancer. 2023 Nov;70(11):e30643. doi: 10.1002/pbc.30643. Epub 2023 Aug 19.

Abstract

Utilization of tumor-only sequencing has expanded in pediatric cancer patients, which can lead to identification of pathogenic variants in genes that may be germline and/or have uncertain relevance to the tumor in question, such as the homologous recombination (HR) pathway genes BRCA1/2. We identified patients with pathogenic BRCA1/2 mutations from somatic tumor sequencing, and performed additional germline sequencing to assess for the presence of loss of heterozygosity (LOH). Of seven patients identified, four (57.1%) mutations were found in the germline and none had associated LOH. Our data suggest that BRCA1/2 mutations identified in this context are likely incidental findings.

Keywords: BRCA; cancer; genomics; homologous recombination; pediatric oncology.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • BRCA1 Protein / genetics
  • BRCA2 Protein / genetics
  • Central Nervous System Neoplasms*
  • Child
  • Female
  • Germ-Line Mutation
  • Humans
  • Loss of Heterozygosity
  • Ovarian Neoplasms* / pathology

Substances

  • BRCA1 protein, human
  • BRCA1 Protein
  • BRCA2 protein, human
  • BRCA2 Protein