MP faculty publications: July 2023

1. HIV-1 capsid stability enables inositol phosphate-independent infection of target cells and promotes integration into genes

   Sowd GA, Shi J, Fulmer A, Aiken C.
   PLoS Pathog. 2023 Jun 2;19(6):e1011423.

2. Increased intestinal permeability and downregulation of absorptive ion transporters Nhe3, Dra, and Sglt1 contribute to diarrhea during Clostridioides difficile infection

   Peritore-Galve FC, Kaji I, Smith A, Walker LM, Shupe JA, Washington MK, Algood HMS, Dudeja PK, Goldenring JR, Lacy DB.
   Gut Microbes. 2023 Jan-Dec;15(1):2225841.

3. Productive Germinal Center Responses Depend on the Nature of Stimuli Received by Anti-Insulin B Cells in Type 1 Diabetes-Prone Mice

   McNitt DH, Joosse BA, Thomas JW, Bonami RH.
   Immunohorizons. 2023 Jun 1;7(6):384-397.

4. Management and Outcomes of Wilms Tumor with Suprarenal Intravascular Extension: A Pediatric Surgical Oncology Research Collaborative Study

   Naik-Mathuria B, Utria AF, Ehrlich PF, Aldrink JH, Murphy AJ, Lautz T, Dasgupta R, Short SS, Lovvorn HN 3rd, Kim ES, Newman E, Lal DR, Rich BS, Piché N, Kastenberg ZJ, Malek MM, Glick RD, Petroze RT, Polites SF, Whitlock R, Alore E, Sutthatarn P, Chen SY, Wong-Michalak S, Romao RL, Al-Hadidi A, Rubalcava NS, Marquart JP, Gainer H, Johnson M, Boehmer C, Rinehardt H, Seemann NM, Davidson J, Polcz V, Lund SB, McKay KG, Correa H, Rothstein DH.
   Ann Surg. 2023 Jun 2.

5. Clinicopathologic Features of Severe Acute Hepatitis Associated With Adenovirus Infection in Children

   Liang J, Kelly DR, Pai A, Gillis LA, Sanchez LHG, Shiau HH, Wang H, Correa H, Mohammad S, Washington K.
   Am J Surg Pathol. 2023

6. Mechanistic basis for potent neutralization of Sin Nombre hantavirus by a human monoclonal antibody

   Stass R, Engdahl TB, Chapman NS, Wolters RM, Handal LS, Diaz SM, Crowe JE Jr, Bowden TA.
   Nat Microbiol. 2023 Jun 15.

7. A mutation in the coronavirus nsp13-helicase impairs enzymatic activity and confers partial remdesivir resistance

   Grimes SL, Choi YJ, Banerjee A, Small G, Anderson-Daniels J, Gribble J, Pruijssers AJ, Agostini ML, Abu-Shmais A, Lu X, Darst SA, Campbell E, Denison MR.
   mBio. 2023 Jun 20:e0106023.

8. Factor XII Structure-Function Relationships

   Shamanaev A, Litvak M, Ivanov I, Srivastava P, Sun MF, Dickeson SK, Kumar S, He TZ, Gailani D.
   Semin Thromb Hemost. 2023 Jun 5.

9. Mechanisms involved in hereditary angioedema with normal C1-inhibitor activity

   Shamanaev A, Dickeson SK, Ivanov I, Litvak M, Sun MF, Kumar S, Cheng Q, Srivastava P, He TZ, Gailani D.
   Front Physiol. 2023 May 23;14:1146834.

10. Immune profiling of murine cardiac leukocytes identifies Trem2 as a novel mediator of hypertensive heart failure

    Smart CD, Fehrenbach DJ, Wassenaar JW, Agrawal V, Fortune NL, Dixon DD, Cottam MA, Hasty AH, Hemnes AR, Doran AC, Gupta DK, Madhur MS.
    Cardiovasc Res. 2023 Jun 14:cvad093.

11. Association of alpha-aminoadipic acid (2-AAA) with cardiometabolic risk factors in healthy and high-risk individuals

    Desine S, Gabriel CL, Smith HM, Antonetti OR, Wang C, Calcutt MW, Doran AC, Silver HJ, Nair S, Terry JG, Carr JJ, Linton MF, Brown JD, Koethe JR, Ferguson JF.
    medRxiv [Preprint]. 2023 Jun 6:2023.06.05.23290990.

12. Pharmacogenetic interactions of efavirenz or rifampin and isoniazid with levonorgestrel emergency contraception during treatment of HIV or tuberculosis

    Agyemang N, Scarsi KK, Baker P, Smeaton LM, Podany AT, Olefsky M, Woolley E, Barr E, Pham M, Mawlana S, Supparatpinyo K, Gatechompol S, Jalil EM, Gadama L, Badal-Faesen S, Van Schalkwyk M, Kayama C, Belaunzaran-Zamudio PF, Godfrey C, Cohn SE, Mngqibisa R, Haas DW; AIDS Clinical Trials Group A5375 Study Team.
    Pharmacogenet Genomics. 2023 Jun 12.

13. Associations of Muscle Density and Area with Coronary Artery Plaque and Physical Function

    Erlandson KM, Umbleja T, Lu MT, Taron J, Ribaudo HJ, Overton ET, Presti RM, Haas DW, Sax PE, Yin MT, Zhai BK, Louis R, Upadhyay N, Eslami P, Douglas PS, Zanni MV, Fitch KV, Fulda ES, Fichtenbaum CJ, Malvestutto CD, Grinspoon SK, Brown TT.
    J Acquir Immune Defic Syndr. 2023 Jun 26.

14. Mapping Niche-specific Two-Component System Requirements in Uropathogenic Escherichia coli

    Brannon JR, Reasoner SA, Bermudez TA, Dunigan TL, Wiebe MA, Beebout CJ, Ross T, Bamidele A, Hadjifrangiskou M.
    bioRxiv [Preprint]. 2023 May 23:2023.05.23.541942.

15. A recombinant technique for mapping functional sites of hetero-trimeric collagen helices: collagen IV CB3 fragment as a prototype for integrin binding

    Boudko SP, Konopka EH, Kim W, Taga Y, Mizuno K, Springer TA, Hudson BG, Moy TI, Lin FY.
    J Biol Chem. 2023 Jun 9:104901.

16. Differential Effects of Glutamine Inhibition Strategies on Antitumor CD8 T Cells

    Madden MZ, Ye X, Chi C, Fisher EL, Wolf MM, Needle GA, Bader JE, Patterson AR, Reinfeld BI, Landis MD, Hathaway ES, Muka JE, O'Neil RT, Karijolich J, Philip M, Rathmell JC
    J Immunol. 2023 Jun 21:ji2200715.

17. Inherited human ezrin deficiency impairs adaptive immunity

    García-Solís B, Van Den Rym A, Martinez-Martínez L, Franco T, Pérez-Caraballo JJ, Markle J, Cubillos-Zapata C, Marín AV, Recio MJ, Regueiro JR, Navarro-Zapata A, Mestre-Durán C, Ferreras C, Cotázar CM, Mena R, Calle-Fabregat C, López-Lera A, Arquero MF, Pérez-Martínez A, López-Collazo E, Sánchez-Ramón S, Casanova JL, Martínez-Barricarte R, de la Calle-Martín O, Pérez de Diego R.
    J Allergy Clin Immunol. 2023 Jun 8:S0091-6749(23)00749-2.

18. Oxidative stress drives mutagenesis through transcription-coupled repair in bacteria

    Carvajal-Garcia J, Samadpour AN, Hernandez Viera AJ, Merrikh H.
    Proc Natl Acad Sci U S A. 2023 Jul 4;120(27):e2300761120.

19. Heat stress and amphibian immunity in a time of climate change

    Rollins-Smith LA, Le Sage EH
    Philos Trans R Soc Lond B Biol Sci. 2023 Jul 31;378(1882):20220132.

20. Determination of Flap Survival Isolated From Wound Bed Vasculature Using a Murine Axial Flap Model

    Hicks MD, Ovaitt AK, Morrison DR, Fleming JC, Jeyarajan H, Greene B, Sorace AG, Patel J, Kasten BB, Hartman YE, Rosenthal EL, Warram JM, Thomas CM.
    Ear Nose Throat J. 2023 Jun 26:1455613231183392.

21. Age and CRP Associated With Improved Tissue Pathogen Identification in Children With Blood Culture Negative Osteomyelitis: Results From the CORTICES Multicenter Database

    Burns JD, Upasani VV, Bastrom TP, Baldwin KD, Schoenecker JG, Shore BJ, Brighton BK, Goldstein RY, Heyworth BE, Miller ML, Sanders JS, Truong WH; Childrens ORthopedic Trauma and Infection Consortium for Evidence-Based Study.
    J Pediatr Orthop. 2023 Jun 5.

22. Accuracy of Time to Treatment Initiation Data in Musculoskeletal Soft Tissue Sarcoma

    Lawrenz JM, Vega JF, George J, Curtis GL, Gordon J, Maggiotto A, Tullio K, Shepard DR, Reith JD, Schwartz HS, Nystrom LM, Mesko NW.
    Sarcoma. 2023 May 23;2023:9022770.

23. Surgical Fixation Method in Lower Extremity Intercalary Allograft Reconstruction After Oncologic Resection: A Comparison of Plates and Nails

    Goldin AN, Johnson SR, Hajdu KS, Kowalski BL, Volkmar AJ, Moran CP, Rekulapelli A, Lawrenz JM, Halpern JL, Schwartz HS, Holt GE.
    J Am Acad Orthop Surg. 2023 Jun 12

24. Gram-Scale Total Synthesis of (±)-Ibogamine

    Hughes AJ, Townsend SD
    Org Lett. 2023 Jun 23;25(24):4567-4570.

25. IL-7 Deficiency Exacerbates Atopic Dermatitis in NC/Nga Mice

    Park HJ, Lee SW, Van Kaer L, Lee MS, Hong S.
    Int J Mol Sci. 2023 Jun 9;24(12):9956.

26. Albumin-binding RNAi Conjugate for Carrier Free Treatment of Arthritis

    Colazo JM, Hoogenboezem EN, Shah V, Yu F, Lo JH, Sorets AG, Francini N, Cho H, Michell DL, Vickers KC, Gibson-Corley KN, Hasty KA, Crofford L, Cook RS, Duvall CL.
    bioRxiv [Preprint]. 2023 Jun 8:2023.05.31.542971.

27. Single cell and spatial sequencing define processes by which keratinocytes and fibroblasts amplify inflammatory responses in psoriasis.

    Ma F, Plazyo O, Billi AC, Tsoi LC, Xing X, Wasikowski R, Gharaee-Kermani M, Hile G, Jiang Y, Harms PW, Xing E, Kirma J, Xi J, Hsu JE, Sarkar MK, Chung Y, Di Domizio J, Gilliet M, Ward NL, Maverakis E, Klechevsky E, Voorhees JJ, Elder JT, Lee JH, Kahlenberg JM, Pellegrini M, Modlin RL, Gudjonsson JE
    Nat Commun. 2023 Jun 12;14(1):3455.

28. ESICM guidelines on acute respiratory distress syndrome: definition, phenotyping and respiratory support strategies

    Grasselli G, Calfee CS, Camporota L, Poole D, Amato MBP, Antonelli M, Arabi YM, Baroncelli F, Beitler JR, Bellani G, Bellingan G, Blackwood B, Bos LDJ, Brochard L, Brodie D, Burns KEA, Combes A, D'Arrigo S, De Backer D, Demoule A, Einav S, Fan E, Ferguson ND, Frat JP, Gattinoni L, Guérin C, Herridge MS, Hodgson C, Hough CL, Jaber S, Juffermans NP, Karagiannidis C, Kesecioglu J, Kwizera A, Laffey JG, Mancebo J, Matthay MA, McAuley DF, Mercat A, Meyer NJ, Moss M, Munshi L, Myatra SN, Ng Gong M, Papazian L, Patel BK, Pellegrini M, Perner A, Pesenti A, Piquilloud L, Qiu H, Ranieri MV, Riviello E, Slutsky AS, Stapleton RD, Summers C, Thompson TB, Valente Barbas CS, Villar J, Ware LB, Weiss B, Zampieri FG, Azoulay E, Cecconi M; European Society of Intensive Care Medicine Taskforce on ARDS.
    Intensive Care Med. 2023 Jun 16

29. Genome-wide Association Study for Acute Kidney Injury

    Bhatraju PK, Stanaway IB, Palmer MR, Menon R, Schaub JA, Menez S, Srivastava A, Wilson FP, Kiryluk K, Palevsky PM, Naik AS, Sakr SS, Jarvik GP, Parikh CR, Ware LB, Ikizler TA, Siew ED, Chinchilli VM, Coca SG, Garg AX, Go AS, Kaufman JS, Kimmel PL, Himmelfarb J, Wurfel MM.
    Kidney360. 2023 Jun 5.

30. CXCR2 expression during melanoma tumorigenesis controls transcriptional programs that facilitate tumor growth

    Yang J, Bergdorf K, Yan C, Luo W, Chen SC, Ayers GD, Liu Q, Liu X, Boothby M, Weiss VL, Groves SM, Oleskie AN, Zhang X, Maeda DY, Zebala JA, Quaranta V, Richmond A.
    Mol Cancer. 2023 Jun 3;22(1):92.

31. A Roadmap for the Human Gut Cell Atlas

    Zilbauer M, James KR, Kaur M, Pott S, Li Z, Burger A, Thiagarajah JR, Burclaff J, Jahnsen FL, Perrone F, Ross AD, Matteoli G, Stakenborg N, Sujino T, Moor A, Bartolome-Casado R, Bækkevold ES, Zhou R, Xie B, Lau KS, Din S, Magness ST, Yao Q, Beyaz S, Arends M, Denadai-Souza A, Coburn LA, Gaublomme JT, Baldock R, Papatheodorou I, Ordovas-Montanes J, Boeckxstaens G, Hupalowska A, Teichmann SA, Regev A, Xavier RJ, Simmons A, Snyder MP, Wilson KT; Gut Cell Atlas Consortium; Human Cell Atlas Gut Biological Network Consortium.
    Nat Rev Gastroenterol Hepatol. 2023 May 31.

32. Serum antibodies to selected Helicobacter pylori antigens are associated with active gastritis in patients seen at the University Teaching Hospital in Lusaka, Zambia

    Kayamba V, Butt J, Varga MG, Shibemba A, Piazuelo MB, Wilson KT, Zyambo K, Mwakamui S, Mulenga C, Waterboer T, Epplein M, Heimburger DC, Atadzhanov M, Kelly P.
    Malawi Med J. 2022 Mar;34(1):17-24.

33. Hypusination Maintains Intestinal Homeostasis and Prevents Colitis and Carcinogenesis by Enhancing Aldehyde Detoxification

    Gobert AP, Smith TM, Latour YL, Asim M, Barry DP, Allaman MM, Williams KJ, McNamara KM, Delgado AG, Short SP, Mirmira RG, Rose KL, Schey KL, Zagol-Ikapitte I, Coleman JS, Boutaud O, Zhao S, Piazuelo MB, Washington MK, Coburn LA, Wilson KT
    2023 Jun 2:S0016-5085(23)00814-4.

34. Influence of Cell-type Ratio on Spatially Resolved Single-cell Transcriptomes using the Tangram Algorithm: Based on Implementation on Single-Cell and MxIF Data

    Cui C, Bao S, Li J, Deng R, Remedios LW, Asad Z, Chiron S, Lau KS, Wang Y, Coburn LA, Wilson KT, Roland JT, Landman BA, Liu Q, Huo Y.
    Proc SPIE Int Soc Opt Eng. 2023 Feb;12471:124710A. Epub 2023 Apr 7.

35. Deep multimodal fusion of image and non-image data in disease diagnosis and prognosis: a review

    Cui C, Yang H, Wang Y, Zhao S, Asad Z, Coburn LA, Wilson KT, Landman BA, Huo Y.
    Prog Biomed Eng (Bristol). 2023 Apr 11;5(2):10.1088/2516-1091/acc2fe.

36. Systemic exposure to bacterial amyloid curli alters the gut mucosal immune response and the microbiome, exacerbating Salmonella-induced arthritis

    Bessho S, Grando KCM, Kyrylchuk K, Miller A, Klein-Szanto AJ, Zhu W, Gallucci S, Tam V, Tükel Ç.
    Gut Microbes. 2023 Jan-Dec;15(1):2221813.