As we connect into the Chinese New Year of the Snake, we embark on change that fosters renewal. Together, on this journey we seek to find commUnity that brings us together in our ambition to discovery that advances health through innovation in data. We seek partnership, collaboration, and courage to bridge domains that serve as new adventures to us all. This journey is both personal and professional. It is for us each as an individual but also a group. Last week as I ventured into the climbing gym, I was re-thinking courage. As a novice, it is sort of intimidating to step onto the mat, try, and fall. There were many excuses to consider not going including my prior (cancer treatment) removal of part of my chest muscle and scar tissue from radiation. But, I found that stepping on the mat also gave me courage to join the commUnity of people trying a line up, falling, and getting up again.

 

In this time of change; courage, commitment to our core values, and steadfastness are needed. We will be asked to face new circumstances and adapt. It is our commUnity, shared values, and commitment to humanism that will matter most. Some changes will pass like wind. But others will require us to stand strong together in our moral and ethical commitment to humanity in all that it is. We may climb, fall, and get up again, but we will be together in the journey.

 

For those of you who joined our 15th Anniversary celebration, I thank you for creating a space of commUnity. You shared remarkable innovation that will change how we think about the importance that people play in driving digital transformation, where governance informs artificial intelligence innovation, how new promises in computational biology will advance therapeutics, and the importance of considerations of equity. What is your commUnity? And, where might you stretch your courage to advance science for health?

 

Amy M. Sitapati, MD

Interim Chief, Division of Biomedical Informatics, UCSD

Interim Chair, Department of Biomedical Informatics, UCSDH

Lawrence S. Friedman Professor of Population Health Endowed Chair

Pronouns: she/her/hers

DBMI celebrated 15 years of innovation, collaboration, and impact in biomedical informatics at our anniversary symposium. The event included various presentations and panel discussions from DBMI faculty, trainees, and guest that focused on genomics, data and equity, digital health, and AI Innovation. We want to give thanks to all our speakers and attendees for a great turnout!

DBMI Interim Chief, Amy Sitapati, MD, was appointed to the UC Office of the President  - UCH Center for Data-driven Insights and Innovation (CDI2) Oversight Board as the UCSD representative joined by DBMI faculty Karandeep Singh, MD, MMSc, who was appointed as a CDI2 technical and strategic advisor. They join DBMI Faculty Chris Longhurst, MD who has been a standing active CDI2 board member. The Oversight Board was assembled in 2019 and consists of members from each campus in the UC Health system as well as members that represent other areas such as ethics and research. The purpose of the Oversight Board is to serve as a coordinating and advisory body for the Center’s work across the health system. The Center oversees the University of California Health Data Warehouse (UCHDW), a unique data asset created by electronic health records (EHR) from the six UC Health Centers as well as claims data from UC’s self-funded health plans and external sources of data such as Vizient and the California Department of Health Care Access and Information (HCAI), formerly the Office of Statewide Health Planning and Development (OSHPD). The UCHDW currently holds data on over nine million patients seen across the UC Health facilities since 2012. University of California Health uses UCHDW data in a safe and responsible way to enhance operational improvements, promote quality patient care, and enable the next generation of clinical research.

DBMI faculty, Karandeep Singh, MD, MMSc, was featured in two articles and a digital checkup through  Healthcare IT News.  In an interview, Dr. Singh discusses where UCSD Health is in using AI, what it is like in his role as a Chief AI Officer, and tips for those looking into a similar role. In a second interview, Dr. Singh gives insight on how he obtained his role as Chief AI Officer and his previous work at UC Michigan. In his Digital Checkup with Bill Swicki, Dr. Singh gives his perspective on other health systems looking to integrate AI and adopt roles similar to his into the health system structure. We invite you to watch part 1 and part 2 of the Digital Checkup.

DBMI was represented at the AMIA 2024 Annual Symposium with three faculty speakers Chris Longhurst, MD, Karandeep Singh, MD, MMSc, and Michael Hogarth, MD. Dr. Longhurst represented DBMI in two sessions regarding AI in healthcare with focuses on addressing EHR and AI, as well as alignment of AI with human values. Dr. Singh spoke in a session on topics that target the translation of AI into clinical care as well as clinical research publication. Dr. Hogarth presented on a recent study on using Large Language Models to identify and classify patient questions in MyChart messages.  

DBMI Predoc and NLM fellow Grace Yu did a poster presentation. Her research project focused on developing a primary care risk score using data from UCSD Health patients to predict primary care healthcare utilization. Among six machine learning models tested, including XGBoost, she and her team identified top healthcare utilizers with strong discrimination. Key predictors were medication count, social determinants of health, and age. This work highlights the potential of advanced risk stratification models to enhance healthcare efficiency and resource allocation, addressing the challenges of rising costs and workforce burnout. Grace shared she thoroughly enjoyed this year’s AMIA conference in San Francisco. “The focus on generative AI and large language models was not only timely but also closely aligned with my research interests.” She attended many insightful talks from both academics and industry leaders, reconnected with old friends, and made some great new connections.

 

We want to thank all of our faculty presenters for representing DBMI flawlessly and for all their hard work.

DBMI Faculty, Kathleen (Kit) Curtius, PhD and co-authors at the Institute of Cancer Research and St Mark’s Hospital, the UK’s specialist bowel hospital, published a study in the journal Gut revealing that people with inflammatory bowel disease (IBD) whose pre-cancerous cells had lost or gained multiple copies of their DNA were far more likely to go on to develop colorectal cancer. The team created an algorithm that calculates the risk of future colorectal cancer, based on the chromosomal DNA altered in the pre-cancerous cells. They found that this biomarker can predict which people with IBD who develop pre-cancerous cells will go on to develop bowel cancer within 5 years with greater than 90% accuracy. This low-cost method could be used in hospitals to test for colorectal cancer risk in people with IBD in the coming years. We invite you to read the featured BBC article here and full publication here. 

We want to take a moment of appreciation and recognize Tyler Bath for reaching 10 years of dedicated service at UC San Diego. Congratulations on this incredible milestone. We want to thank you for all your hard work and contributions to DBMI and celebrate this impressive achievement with you. 

Kathleen Curtius, PhD

Dr. Curtius was awarded the Leah Edelstein-Keshet Prize through the Society for Mathematical Biology. She was awarded the Junior version of the award, which recognizes a woman in an early stage of her career who has made exceptional scientific contributions to mathematical biology, developed a strong independent research program, and exhibited a continuously high level of scientific endeavor and leadership. We want to congratulate Dr. Curtius on this award for all her dedication. We invite you to read more about the Leah Edelstein-Keshet Prize here.

 

Amy Sitapati, MD
Dr. Sitapati has been appointed as the Lawrence S. Friedman Professor of Population Health Endowed Chair, in the Department of Medicine, School of Medicine. This appointment was based on the recommendation of campus reviewers and the enthusiastic endorsement by Vice Chancellor Carethers, Senior Assistant Vice Chancellor Ross, and Senior Associate Vice Chancellor Continetti. Dr. Sitapati was also Appointed Advisor for California Department of Health Care Access and Information (HCAI) Hospital Equity Measures Advisory Committee ( as a sworn member) in October 2024. In January 2025, she also joined the Board of Directors for the California Safety Net Institute (SNI).

 

Chris Longhurst, MD

Congratulations to Chris Longhurst, MD, for winning AMIA’s Signature Award - The Don Eugene Detmer Award for Health Policy Contributions in Informatics!

DBMI Predoc, Lauryn Keeler Bruce recently published an article in Nature along with their lab mate Jamie Burks. Below is an excerpt from her abstract.

 

 "Here I explore longitudinal physiological data from commercial wearable devices to understand variability between sexes in two related physiological measurements: temperature and activity. I also present the first published dataset of physiological measurements that characterized measurements across all of pregnancy revealing clear trajectories of pregnancy from menstruation to conception through postpartum recovery. In our assessment of individuals in whom pregnancy did not progress past the first trimester, we found associated deviations, corroborating that continuous monitoring adds new information that could support decision-making in the early stages of pregnancy. Lastly, I present high-performing explainable models that detect onset of pregnancy, demonstrating feasibility for developing related services for real-world use. Through this research, I have demonstrated that low-cost, high-resolution monitoring in real-world settings supports development of women’s health algorithms, as well as inclusion and equity in research." You can read more about the study and its findings here.

 

 

We want to take time to celebrate the following students for successfully defending their dissertations! 

 

Lauryn R. Keeler Bruce
“Promoting Equitable Health Using Time Series Wearable Data to Explore Sex Differences and Characterize Pregnancy” 

 

Jonathan Pekar
“The zoonotic origins and molecular epidemiology of SARS-CoV-2”

 

Fatemeh Amrollahi

"Generalizable Risk Predictive Deep Learning Models"

Did you know that you can give recognition to another UCSD Health employee using the MyPerformance system? Go into MyPerformance (Blink > Personal > UCLearning > MyPerformance > Continuous Feedback > Provide Recognition) to give them a shout-out. The staff member will receive notice of the positive recognition, and their supervisor will be cc’ed. If you received fantastic service from someone in IT, HR, housekeeping, or a colleague, don’t hesitate to use the system to thank them.

Did you know that DBMI has a virtual suggestion box where you can provide anonymous feedback? You can access that here. You can also access the virtual suggestion box on the DBMI website – scroll to the bottom of the homepage and click on the feedback link.

 

Luke JJ, Sweis RF, Hecht JR, Schneider R, Stein MN, Golan T, Yap TA, Khilnani A, Huang M, Zhao R, Jemielita T, Patel SP. Intratumoral or Subcutaneous MK-2118, a Non-Cyclic Dinucleotide STING Agonist, With or Without Pembrolizumab for Advanced or Metastatic Solid Tumors or Lymphomas. Clin Cancer Res. 2025 Jan 23. doi: 10.1158/1078-0432.CCR-24-2824. Online ahead of print.PMID: 39846804

 

Gabriel RA, Park BH, Hsu CN, Macias AA. A Review of Leveraging Artificial Intelligence to Predict Persistent Postoperative Opioid Use and Opioid Use Disorder and its Ethical Considerations. Curr Pain Headache Rep. 2025 Jan 23;29(1):30. doi: 10.1007/s11916-024-01319-2. PMID: 39847176 Review.

 

Guccione C, Patel L, Tomofuji Y, McDonald D, Gonzalez A, Sepich-Poore GD, Sonehara K, Zakeri M, Chen Y, Dilmore AH, Damle N, Baranzini SE, Hightower G, Nakatsuji T, Gallo RL, Langmead B, Okada Y, Curtius K, Knight R. Incomplete human reference genomes can drive false sex biases and expose patient-identifying information in metagenomic data. Nat Commun. 2025 Jan 18;16(1):825. doi: 10.1038/s41467-025-56077-5. PMID: 39827261 

 

Tully JL, Litake O, Meineke MN, Simpson S, Waterman RS, Gabriel RA. Classification of Surgical Patients Needing Preoperative Cardiac Evaluations: A Comparison of General-Purpose and Domain-Specific Large Language Models. Anesth Analg. 2025 Jan 14. doi: 10.1213/ANE.0000000000007408. Online ahead of print. PMID: 39808709 No abstract available.

 

Faraji F, Ramirez SI, Clubb LM, Sato K, Burghi V, Hoang TS, Officer A, Anguiano Quiroz PY, Galloway WMG, Mikulski Z, Medetgul-Ernar K, Marangoni P, Jones KB, Cao Y, Molinolo AA, Kim K, Sakaguchi K, Califano JA 3rd, Smith Q, Goren A, Klein OD, Tamayo P, Gutkind JS. YAP-driven malignant reprogramming of oral epithelial stem cells at single cell resolution. Nat Commun. 2025 Jan 8;16(1):498. doi: 10.1038/s41467-024-55660-6. PMID: 39779672 Free PMC article.

McCradden MD, London AJ, Gichoya JW, Sendak M, Erdman L, Stedman I, Oakden-Rayner L, Akrout I, Anderson JA, Farmer LA, Greer R, Goldenberg A, Ho Y, Joshi S, Louise J, Mamdani M, Mazwi ML, Mohamud A, Palmer LJ, Peperidis A, Pfohl SR, Rickard M, Semmler C, Singh K, Singh D, Soremekun S, Tikhomirov L, van der Vegt AH, Verspoor K, Liu X. CANAIRI: the Collaboration for Translational Artificial Intelligence Trials in healthcare. Nat Med. 2025 Jan 6. doi: 10.1038/s41591-024-03364-1. Online ahead of print. PMID: 39762426 No abstract available.

 

Begzati A, Godinez-Macias KP, Long T, Watrous JD, Moranchel R, Kantz ED, Tuomilehto J, Havulinna AS, Niiranen TJ, Jousilahti P, Salomaa V, Yu B, Norby F, Rebholz CM, Selvin E, Winzeler EA, Cheng S, Alotaibi M, Goyal R, Ideker T, Jain M, Majithia AR. Plasma Lipid Metabolites, Clinical Glycemic Predictors, and Incident Type 2 Diabetes. Diabetes Care. 2025 Jan 6:dc242266. doi: 10.2337/dc24-2266. Online ahead of print. PMID: 39761415

 

Kiraly J, Berzi A, El-Kareh R, Sebestyen E, Ujvarosy D, Emri M, Bhattoa HP, Kappelmayer J, Miller KE, Toth G. Breaking the guidelines: how financial unawareness fuels guideline deviations and inefficient DVT diagnostics. Diagnosis (Berl). 2025 Jan 6. doi: 10.1515/dx-2024-0165. Online ahead of print. PMID: 39752665

 

Chen JS, Esko JD, Walker E, Gordts PLSM, Baxter SL, Toomey CB. High Density Lipoproteins Associate with Age-Related Macular Degeneration in the All of Us Research Program. Ophthalmology. 2025 Jan 3:S0161-6420(25)00002-8. doi: 10.1016/j.ophtha.2024.12.039. Online ahead of print. PMID: 39756691

Strober BJ, Zhang MJ, Amariuta T, Rossen J, Price AL. Fine-mapping causal tissues and genes at disease-associated loci. Nat Genet. 2025 Jan 2. doi: 10.1038/s41588-024-01994-2. Online ahead of print. PMID: 39747598

 

Lo JE, Schmickl CN, Vaida F, Nemati S, Singh K, Sands SA, Owens RL, Malhotra A, Orr JE. The combination of physiology and machine learning for prediction of CPAP pressure and residual AHI in OSA. J Clin Sleep Med. 2025 Jan 2. doi: 10.5664/jcsm.11498. Online ahead of print. PMID: 39745438

 

Mandeville R, Sedghamiz H, Mansfield P, Sheean G, Studer C, Cordice D, Ghanbari G, Malhotra A, Nemati S, Koola J. Deep learning enhanced transmembranous electromyography in the diagnosis of sleep apnea. BMC Neurosci. 2024 Dec 31;25(1):80. doi: 10.1186/s12868-024-00913-9. PMID: 39741274 Free PMC article.

 

Yuan Y, Biswas P, Zemke NR, Dang K, Wu Y, D'Antonio M, Xie Y, Yang Q, Dong K, Lau PK, Li D, Seng C, Bartosik W, Buchanan J, Lin L, Lancione R, Wang K, Lee S, Gibbs Z, Ecker J, Frazer K, Wang T, Preissl S, Wang A, Ayyagari R, Ren B. Single-cell analysis of the epigenome and 3D chromatin architecture in the human retina. bioRxiv [Preprint]. 2024 Dec 29:2024.12.28.630634. doi: 10.1101/2024.12.28.630634. PMID: 39764062 Free PMC article.

 

Bendik J, Castro A, Califano J, Carter H, Guo T. Identifying Strong Neoantigen MHC-I/II Binding Candidates for Targeted Immunotherapy with SINE. Int J Mol Sci. 2024 Dec 29;26(1):205. doi: 10.3390/ijms26010205. PMID: 39796063 Free PMC article.

 

Rojo Domingo M, Conlin CC, Karunamuni R, Ollison C, Baxter MT, Kallis K, Do DD, Song Y, Kuperman J, Shabaik AS, Hahn ME, Murphy PM, Rakow-Penner R, Dale AM, Seibert TM. Utility of quantitative measurement of T2 using restriction spectrum imaging for detection of clinically significant prostate cancer. Sci Rep. 2024 Dec 28;14(1):31318. doi: 10.1038/s41598-024-82742-8. PMID: 39732834 Free PMC article.

 

Lee HH, Solitano V, Singh S, Ananthakrishnan AN, Jairath V, Syal G, Boland BS, Ghosh P, Chang JT, Singh S. Differential Efficacy of Advanced Therapies in Inducing Remission in Ulcerative Colitis Based on Prior Exposure to TNF Antagonists. Clin Gastroenterol Hepatol. 2024 Dec 26:S1542-3565(24)01132-7. doi: 10.1016/j.cgh.2024.12.007. Online ahead of print. PMID: 39732355 Review.

 

Do VM, Simpson S, Fisch KM, Gabriel RA. Associations Between Social Determinants of Health and Opioid-Use Disorder Among Chronic Pain Patients From a Multi-Institutional Dataset. Anesth Analg. 2024 Dec 23. doi: 10.1213/ANE.0000000000007247. Online ahead of print. PMID: 39715077

 

Shiller M, Johnson M, Auber R, Patel SP.  Clinical perspectives on the value of testing for STK11 and KEAP1 mutations in advanced NSCLC. Front Oncol. 2024 Dec 5;14:1459737. doi: 10.3389/fonc.2024.1459737. eCollection 2024. PMID: 39703851 Free PMC article.

 

Boussina A, Krishnamoorthy R, Quintero K, Joshi S, Wardi G, Pour H, Hilbert N, Malhotra A, Hogarth M, Sitapati AM, VanDenBerg C, Singh K, Longhurst CA, Nemati S. Large Language Models for More Efficient Reporting of Hospital Quality Measures. NEJM AI. 2024 Oct 24;1(11):10.1056/aics2400420. doi: 10.1056/aics2400420. Epub 2024 Oct 21. PMID: 39703686 Free PMC article.

 

Reeves JJ, Goldhaber N, Hollandsworth H, Cox K, Dumitru AM, Zhao B, Longhurst CA, Berumen J, Berndtson AE, Jacobsen G, Clary B. Leveraging Lean Methodology to Improve Compliance With Work-Hour Restrictions. JAMA Surg. 2024 Dec 18. doi: 10.1001/jamasurg.2024.5518. Online ahead of print.PMID: 39693087

Shashikumar SP, Nemati S. A Prospective Comparison of Large Language Models for Early Prediction of Sepsis. Pac Symp Biocomput. 2025;30:109-120.PMID: 39670365

 

Lam JY, Lu X, Shashikumar SP, Lee YS, Miller M, Pour H, Boussina AE, Pearce AK, Malhotra A, Nemati S. Development, deployment, and continuous monitoring of a machine learning model to predict respiratory failure in critically ill patients. JAMIA Open. 2024 Dec 11;7(4):ooae141. doi: 10.1093/jamiaopen/ooae141. eCollection 2024 Dec. PMID: 39664647 Free PMC article.

 Park BH, Macias AA, Fisch KM, Simpson S, Chen J, Gabriel RA. The Association of Social Determinants of Health With Reported Daily Pain Scores Among Patients With a History of Chronic Pain Using the "All of Us" Research Program. Anesth Analg. 2024 Dec 11. doi: 10.1213/ANE.0000000000007211. Online ahead of print. PMID: 39661558 No abstract available.

 

Haynesworth A, Yeh KH, Lee HH, Kirkpatrick M, Boland BS, Syal G, Xu R, Singh S. Long-Term Outcomes of an Infliximab-First Versus Vedolizumab-First Treatment Strategy in Biologic-Naïve Patients With Ulcerative Colitis. Aliment Pharmacol Ther. 2024 Dec 11. doi: 10.1111/apt.18441. Online ahead of print. PMID: 39660680

 

Sears T, Carter H. MHC-Hammer decodes HLA disruption in tumors. Cancer Res. 2024 Dec 5. doi: 10.1158/0008-5472.CAN-24-4553. Online ahead of print. PMID: 39636736

Luo Y, Huang CC, Howard NC, Wang X, Liu Q, Li X, Zhu J, Amariuta T, Asgari S, Ishigaki K, Calderon R, Raman S, Ramnarine AK, Mayfield JA, Moody DB, Lecca L, Fortune SM, Murray MB, Raychaudhuri S. Paired analysis of host and pathogen genomes identifies determinants of human tuberculosis. Nat Commun. 2024 Nov 29;15(1):10393. doi: 10.1038/s41467-024-54741-w. PMID: 39613754 Free PMC article.

 

Rule A, El-Kareh R. Employing EHR usage data to improve care requires clinician engagement and trust. J Hosp Med. 2024 Nov 28. doi: 10.1002/jhm.13565. Online ahead of print. PMID: 39609937 No abstract available.

 

Yu Y, Edelson M, Pham A, Pekar JE, Johnson B, Post K, Kuo TT. Distributed, immutable, and transparent biomedical limited data set request management on multi-capacity network. J Am Med Inform Assoc. 2024 Nov 21:ocae288. doi: 10.1093/jamia/ocae288. Online ahead of print. PMID: 39569448

 

Arseniev-Koehler A. Theoretical foundations and limits of word embeddings: What types of meaning can they capture? Sociol Methods Res. 2024 Nov;53(4):1753-1793. doi: 10.1177/00491241221140142. Epub 2022 Dec 7. PMID: 39554804 Free PMC article.

 

Heinke A, Zhang H, Broniarek K, Michalska-Małecka K, Elsner W, Galang CMB, Deussen DN, Warter A, Kalaw F, Nagel I, Agnihotri A, Mehta NN, Klaas JE, Schmelter V, Kozak I, Baxter SL, Bartsch DU, Cheng L, An C, Nguyen T, Freeman WR. Cross-instrument optical coherence tomography-angiography (OCTA)-based prediction of age-related macular degeneration (AMD) disease activity using artificial intelligence. Sci Rep. 2024 Nov 7;14(1):27085. doi: 10.1038/s41598-024-78327-0.  PMID: 39511248

Chuang EG, Richardson AC, Boulil Z, Kuelbs CL, Huang JS. Disparities in Patient Portal Activation and Usage at a Large Pediatric Academic Institution. J Racial Ethn Health Disparities. 2024 Nov 4. doi: 10.1007/s40615-024-02009-w. Online ahead of print. PMID: 39497018

 

 Murphy PM, An JY, Wojdyla LM, Searleman AC, Khurana A, Loehfelm TW, Fowler KJ, Longhurst CA. Diagnostic Performance of a Next-Generation Virtual/Augmented Reality Headset: A Pilot Study of Diverticulitis on CT.J Imaging Inform Med. 2024 Nov 4. doi: 10.1007/s10278-024-01292-7. Online ahead of print. PMID: 39495441

 

Hallaj S, Halfpenny W, Chuter BG, Weinreb RN, Baxter SL, Cui QN. Response to: "Comment on: Association between Glucagon-Like Peptide 1 (GLP-1) Receptor Agonists Exposure and Intraocular Pressure Change". Am J Ophthalmol. 2024 Oct 30:S0002-9394(24)00493-8. doi: 10.1016/j.ajo.2024.10.021. Online ahead of print. PMID: 39486630 No abstract available.

 

Murphy PM, An JY, Wojdyla LM, Searleman AC, Khurana A, Loehfelm TW, Fowler KJ, Longhurst CA. Diagnostic Performance of a Next-Generation Virtual/Augmented Reality Headset: A Pilot Study of Diverticulitis on CT. J Imaging Inform Med. 2024 Nov 4. doi: 10.1007/s10278-024-01292-7. Online ahead of print. PMID: 39495441

 

Hallaj S, Halfpenny W, Chuter BG, Weinreb RN, Baxter SL, Cui QN. Response to: "Comment on: Association between Glucagon-Like Peptide 1 (GLP-1) Receptor Agonists Exposure and Intraocular Pressure Change". Am J Ophthalmol. 2024 Oct 30:S0002-9394(24)00493-8. doi: 10.1016/j.ajo.2024.10.021. Online ahead of print. PMID: 39486630

 

Sanz Vidorreta FJ, Dudley MT, Walling AM, Tseng CH, Hogarth M, Wenger NS.  Patient characteristics and health system encounters of decedents not marked deceased in the electronic health record.  JAMIA Open. 2024 Oct 29;7(4):ooae121. doi: 10.1093/jamiaopen/ooae121. eCollection 2024 Dec. PMID: 39473881 

 

Koola JD, Ramesh K, Mao J, Ahn M, Davis SE, Govindarajulu U, Perkins AM, Westerman D, Ssemaganda H, Speroff T, Ohno-Machado L, Ramsay CR, Sedrakyan A, Resnic FS, Matheny ME.  A machine learning framework to adjust for learning effects in medical device safety evaluation.  J Am Med Inform Assoc. 2024 Oct 29:ocae273. doi: 10.1093/jamia/ocae273. Online ahead of print.
PMID: 39471493

 

Tahir MW, Rosli Y, Leung C, Wysham KD, Lee J, Stovall R, Goulabchand R, Makris UE, Singh S, Singh N. Frailty and its association with readmissions in patients with rheumatoid arthritis: A national readmissions database study.Clin Rheumatol. 2024 Oct 19. doi: 10.1007/s10067-024-07200-2. Online ahead of print. PMID: 39425849

 

Ananthakrishnan AN, Murad MH, Scott FI, Agrawal M, Haydek JP, Limketkai BN, Loftus EV Jr, Singh S. Comparative Efficacy of Advanced Therapies for Management of Moderate-to-Severe Ulcerative Colitis: 2024 American Gastroenterological Association Evidence Synthesis. Gastroenterology. 2024 Oct 18:S0016-5085(24)05480-5. doi: 10.1053/j.gastro.2024.07.046. Online ahead of print. PMID: 39425738

 

Stadnick NA, Aarons GA, Edwards HN, Bryl AW, Kuelbs CL, Helm JL, Brookman-Frazee L. Cluster randomized trial of a team communication training implementation strategy for depression screening in a pediatric healthcare system: a study protocol. Implement Sci Commun. 2024 Oct 18;5(1):117. doi: 10.1186/s43058-024-00641-5.PMID: 39425229

 

Chae YK, Othus M, Patel SP, Wilkinson KJ, Whitman-Purves EM, Lea J, Schallenkamp JM, Adra N, Appleman LJ, Alden M, Thomes Pepin J, Ellerton JA, Poklepovic A, Walter A, Rampurwala MM, Robinson WR, Kim HS, Chung LI, McLeod CM, Lopez G, Chen HX, Sharon E, Streicher H, Ryan CW, Blanke CD, Kurzrock R. SWOG/NCI Phase II Dual Anti-CTLA-4/PD-1 Blockade in Rare Tumors (DART): Non-Epithelial Ovarian Cancer. Clin Cancer Res. 2024 Oct 17. doi: 10.1158/1078-0432.CCR-24-0606. Online ahead of print. PMID: 39417692

 

Chae YK, Othus M, Bedi S, Liu Y, Orr-Ewing L, Dash D, Koyejo S, Callahan A, Fries JA, Wornow M, Swaminathan A, Lehmann LS, Hong HJ, Kashyap M, Chaurasia AR, Shah NR, Singh K, Tazbaz T, Milstein A, Pfeffer MA, Shah NH. Testing and Evaluation of Health Care Applications of Large Language Models: A Systematic Review. JAMA. 2024 Oct 15:e2421700. doi: 10.1001/jama.2024.21700. Online ahead of print. PMID: 39405325

 

Solitano V, Hogan M, Singh S, Danese S, Peyrin-Biroulet L, Zou G, Yuan Y, Sands BE, Feagan BG, Dulai PS, Narula N, Ma C, Jairath V. Placebo rates in Crohn's disease randomized clinical trials: An individual patient data meta-analysis. Gastroenterology. 2024 Oct 14:S0016-5085(24)05571-9. doi: 10.1053/j.gastro.2024.10.009. Online ahead of print. PMID: 39414161

 

Jansen CS, Pagadala MS, Cardenas MA, Prabhu RS, Goyal S, Zhou C, Chappa P, Vo BT, Ye C, Hopkins B, Zhong J, Klie A, Daniels T, Admassu M, Green I, Pfister NT, Neill SG, Switchenko JM, Prokhnevska N, Hoang KB, Torres MA, Logan S, Olson JJ, Nduom EK, Del Balzo L, Patel K, Burri SH, Asher AL, Wilkinson S, Lake R, Kesarwala AH, Higgins KA, Patel P, Dhere V, Sowalsky AG, Carter H, Khan MK, Kissick H, Buchwald ZS. Pre-operative stereotactic radiosurgery and peri-operative dexamethasone for resectable brain metastases: a two-arm pilot study evaluating clinical outcomes and immunological correlates. Nat Commun. 2024 Oct 14;15(1):8854. doi: 10.1038/s41467-024-53034-6.PMID: 39402027

 

Ahuja D, Zou G, Solitano V, Syal G, Lee HH, Ma C, Jairath V, Singh S. No Impact of Concomitant Medications on Efficacy and Safety of Biologics and Small Molecules for Ulcerative Colitis.Clin Gastroenterol Hepatol. 2024 Oct 10:S1542-3565(24)00877-2. doi: 10.1016/j.cgh.2024.08.040. Online ahead of print. PMID: 39395572

 

Johnson B, Curtius K. Digital twins are integral to personalizing medicine and improving public health. Nat Rev Gastroenterol Hepatol. 2024 Oct 9. doi: 10.1038/s41575-024-00992-3. Online ahead of print. PMID: 39384936 No abstract available.

 

Zumsteg ZS, Sheth S, Jabbour SK, Patel KR, Kimple RJ, Williams TM, Xu-Welliver M, Torres-Saavedra PA, Monjazeb AM, Mayadev J, Finkelstein SE, Buatti JM, Patel SP, Lin SH. Challenges and opportunities for early phase clinical trials of novel drug-radiotherapy combinations: recommendations from NRG Oncology, the American Society for Radiation Oncology (ASTRO), the American College of Radiology (ACR), the Sarah Cannon Research Institute, and the American College of Radiation Oncology (ACRO). Lancet Oncol. 2024 Oct;25(10):e489-e500. doi: 10.1016/S1470-2045(24)00264-X.PMID: 39362260 Review.

 

Bongbong DN, Abdou W, Said ET, Gabriel RA. National trends in perioperative epidural analgesia use for surgical patients. J Clin Anesth. 2024 Oct 1;99:111642. doi: 10.1016/j.jclinane.2024.111642. Online ahead of print. PMID: 39357395

 

Chae YK, Othus M, Patel S, Powers B, Hsueh CT, Govindarajan R, Bucur S, Kim HS, Chung LI, McLeod C, Chen HX, Sharon E, Streicher H, Ryan CW, Blanke C, Kurzrock R. Phase II basket trial of dual anti-CTLA-4 and anti-PD-1 blockade in rare tumors (DART) SWOG S1609: the desmoid tumors. J Immunother Cancer. 2024 Sep 28;12(9):e009128. doi: 10.1136/jitc-2024-009128. PMID: 39343510 Free PMC article. Clinical Trial.

 

Chen JS, Reddy AJ, Al-Sharif E, Shoji MK, Kalaw FGP, Eslani M, Lang PZ, Arya M, Koretz ZA, Bolo KA, Arnett JJ, Roginiel AC, Do JL, Robbins SL, Camp AS, Scott NL, Rudell JC, Weinreb RN, Baxter SL, Granet DB. Analysis of ChatGPT Responses to Ophthalmic Cases: Can ChatGPT Think like an Ophthalmologist? Ophthalmol Sci. 2024 Aug 23;5(1):100600. doi: 10.1016/j.xops.2024.100600. eCollection 2025 Jan-Feb. PMID: 39346575 Free PMC article.

 

Goldhaber NH, Ramesh K, Horton LE, Longhurst CA, Huang E, Horgan S, Jacobsen GR, Sandler BJ, Broderick RC.  The Long Haul to Surgery: Long COVID Has Minimal Burden on Surgical Departments.  Int J Environ Res Public Health. 2024 Sep 12;21(9):1205. doi: 10.3390/ijerph21091205.  PMID: 39338088

 

Chen JS, Reddy AJ, Al-Sharif E, Shoji MK, Kalaw FGP, Eslani M, Lang PZ, Arya M, Koretz ZA, Bolo KA, Arnett JJ, Roginiel AC, Do JL, Robbins SL, Camp AS, Scott NL, Rudell JC, Weinreb RN, Baxter SL, Granet DB.  Analysis of ChatGPT Responses to Ophthalmic Cases: Can ChatGPT Think like an Ophthalmologist? Ophthalmol Sci. 2024 Aug 23;5(1):100600. doi: 10.1016/j.xops.2024.100600. eCollection 2025 Jan-Feb. PMID: 39346575 

 

Bongbong DN, Abdou W, Said ET, Gabriel RA.  National trends in perioperative epidural analgesia use for surgical patients. J Clin Anesth. 2024 Oct 1;99:111642. doi: 10.1016/j.jclinane.2024.111642. Online ahead of print. 

 

Gabriel RA, Litake O, Simpson S, Burton BN, Waterman RS, Macias AA. On the development and validation of large language model-based classifiers for identifying social determinants of health. Proc Natl Acad Sci U S A. 2024 Sep 24;121(39):e2320716121. doi: 10.1073/pnas.2320716121. Epub 2024 Sep 16. PMID: 39284061

 

DeForest N, Wang Y, Zhu Z, Dron JS, Koesterer R, Natarajan P, Flannick J, Amariuta T, Peloso GM, Majithia AR. Genome-wide discovery and integrative genomic characterization of insulin resistance loci using serum triglycerides to HDL-cholesterol ratio as a proxy. Nat Commun. 2024 Sep 14;15(1):8068. doi: 10.1038/s41467-024-52105-y. PMID: 39277575

 

Yoo K, Lee C, Baxter SL, Xu BY. Relationship Between Glaucoma and Chronic Stress Quantified by Allostatic Load Score in the All of Us Research Program. Am J Ophthalmol. 2024 Sep 11:S0002-9394(24)00429-X. doi: 10.1016/j.ajo.2024.09.009. Online ahead of print.PMID: 39271092

 

Simpson S, Zhong W, Mehdipour S, Armaneous M, Sathish V, Walker N, Said ET, Gabriel RA. Classifying High-Risk Patients for Persistent Opioid Use After Major Spine Surgery: A Machine-Learning Approach. Anesth Analg. 2024 Oct 1;139(4):690-699. doi: 10.1213/ANE.0000000000006832. Epub 2024 Sep 4.PMID: 39284134

 

Sears TJ, Pagadala MS, Castro A, Lee KH, Kong J, Tanaka K, Lippman SM, Zanetti M, Carter H. Integrated germline and somatic features reveal divergent immune pathways driving response to immune checkpoint blockade. Cancer Immunol Res. 2024 Sep 10. doi: 10.1158/2326-6066.CIR-24-0164. Online ahead of print. PMID: 39255339

 

Neprash HT, Dameff C, Tully J. Cybersecurity Lessons From the Change Healthcare Attack. JAMA Intern Med. 2024 Sep 9. doi: 10.1001/jamainternmed.2024.3162. Online ahead of print. PMID: 39250110

 

Shashikumar SP, Le JP, Yung N, Ford J, Singh K, Malhotra A, Nemati S, Wardi G. Development and Validation of a Deep Learning Model for Prediction of Adult Physiological Deterioration. Crit Care Explor. 2024 Sep 11;6(9):e1151. doi: 10.1097/CCE.0000000000001151. eCollection 2024 Sep 1. PMID: 39258951

 

Kalaw FGP, Baxter SL. Ethical considerations for large language models in ophthalmology. Curr Opin Ophthalmol. 2024 Aug 27. doi: 10.1097/ICU.0000000000001083. Online ahead of print. PMID: 39259616 

 

Graber ML, Castro GM, Danforth M, Tilly JL, Croskerry P, El-Kareh R, Hemmalgarn C, Ryan R, Tozier MP, Trowbridge B, Wright J, Zwaan L.  Root cause analysis of cases involving diagnosis.  Diagnosis (Berl). 2024 Sep 3. doi: 10.1515/dx-2024-0102. Online ahead of print.  PMID: 39238228

 

Radgoudarzi N, Dallalzadeh L, Saseendrakumar BR, Guo J, Halfpenny W, Kikkawa DO, Baxter S.  Medical, Environmental, and Social Determinants Associated With Periocular Cutaneous Malignancies in the United States Using the All of Us National Database.  Cureus. 2024 Jul 31;16(7):e65831. doi: 10.7759/cureus.65831. eCollection 2024 Jul. PMID: 39219888 Free PMC article.

 

Florez N, Patel SP, Wakelee H, Bazhenova L, Massarelli E, Salgia R, Stiles B, Peters S, Malhotra J, Gadgeel SM, Nieva JJ, Afkhami M, Hirsch FR, Gubens M, Cascone T, Levy B, Sabari J, Husain H, Ma PC, Backhus LM, Iyengar P, Lee P, Miller R, Sands J, Kim E. Proceedings of the 1st biannual bridging the gaps in lung cancer conference. Oncologist. 2024 Sep 5:oyae228. doi: 10.1093/oncolo/oyae228. Online ahead of print. PMID: 39237103

 

Graber ML, Castro GM, Danforth M, Tilly JL, Croskerry P, El-Kareh R, Hemmalgarn C, Ryan R, Tozier MP, Trowbridge B, Wright J, Zwaan L. Root cause analysis of cases involving diagnosis. Diagnosis (Berl). 2024 Sep 3. doi: 10.1515/dx-2024-0102. Online ahead of print. PMID: 39238228

 

Hallaj S, Halfpenny W, Chuter BG, Weinreb RN, Baxter SL, Cui QN. Association between Glucagon-Like Peptide 1 (GLP-1) Receptor Agonists Exposure and Intraocular Pressure Change: GLP-1 Receptor Agonists and Intraocular Pressure Change. Am J Ophthalmol. 2024 Sep 3:S0002-9394(24)00392-1. doi: 10.1016/j.ajo.2024.08.030. Online ahead of print. PMID: 39237049

 

Tyack Z, McPhail S, Aarons GA, McGrath K, Barron A, Carter H, Larkins S, Barnett A, Hummell E, Tulleners R, Fisher O, Harvey G, Jones L, Murray K, Abell B. Evaluating the tailored implementation of a multisite care navigation service for mental health in rural and remote Australia (The Bridging Study): protocol for a community-engaged hybrid effectiveness-implementation study. Implement Sci. 2024 Sep 4;19(1):62. doi: 10.1186/s13012-024-01391-7. PMID: 39232820

 

Radgoudarzi N, Dallalzadeh L, Saseendrakumar BR, Guo J, Halfpenny W, Kikkawa DO, Baxter S. Medical, Environmental, and Social Determinants Associated With Periocular Cutaneous Malignancies in the United States Using the All of Us National Database. Cureus. 2024 Jul 31;16(7):e65831. doi: 10.7759/cureus.65831. eCollection 2024 Jul. PMID: 39219888 Free PMC article.

 

Hallaj S, Chuter BG, Lieu AC, Singh P, Kalpathy-Cramer J, Xu BY, Christopher M, Zangwill LM, Weinreb RN, Baxter SL. Federated Learning in Glaucoma: A Comprehensive Review and Future Perspectives. Ophthalmol Glaucoma. 2024 Aug 28:S2589-4196(24)00143-1. doi: 10.1016/j.ogla.2024.08.004. Online ahead of print. PMID: 39214457 Review.

 

Zamani M, Alizadeh-Tabari S, Ajmera V, Singh S, Murad MH, Loomba R. Global prevalence of advanced liver fibrosis and cirrhosis in the general population: a systematic review and meta-analysis. Clin Gastroenterol Hepatol. 2024 Aug 27:S1542-3565(24)00790-0. doi: 10.1016/j.cgh.2024.08.020. Online ahead of print. PMID: 39209202 Review.

 

Singh S, Poulsen GJ, Bisgaard TH, Bonfils L, Jess T. Epidemiology of Elderly-Onset IBD: A Nationwide Population-based Cohort Study. Clin Gastroenterol Hepatol. 2024 Aug 27:S1542-3565(24)00779-1. doi: 10.1016/j.cgh.2024.08.011. Online ahead of print. PMID: 39209204

 

Gastrointestinal Malignancy: Genetic Implications to Clinical Applications.Trembath HE, Yeh JJ, Lopez NE. Gastrointestinal Malignancy: Genetic Implications to Clinical Applications. Cancer Treat Res. 2024;192:305-418. doi: 10.1007/978-3-031-61238-1_15. PMID: 39212927 Review.

 

Lyons PG, Dorr DA, Melton GB, Singh K, Payne PRO. Meeting the Artificial Intelligence Needs of U.S. Health Systems.   Ann Intern Med. 2024 Aug 27. doi: 10.7326/ANNALS-24-00396. Online ahead of print. PMID: 39186786 No abstract available.

 

Malka S, Biswas P, Berry AM, Sangermano R, Ullah M, Lin S, D'Antonio M, Jestin A, Jiao X, Quinodoz M, Sullivan L, Gardner JC, Place EM, Michaelides M, Kaminska K, Mahroo OA, Schiff E, Wright G, Cancellieri F, Vaclavik V, Santos C, Rehman AU, Mehrotra S, Azhar Baig HM, Iqbal M, Ansar M, Santos LC, Sousa AB, Tran VH, Matsui H, Bhatia A, Naeem MA, Akram SJ, Akram J, Riazuddin S, Ayuso C, Pierce EA, Hardcastle AJ, Riazuddin SA, Frazer KA, Hejtmancik JF, Rivolta C, Bujakowska KM, Arno G, Webster AR, Ayyagari R. Substitution of a single non-coding nucleotide upstream of TMEM216 causes non-syndromic retinitis pigmentosa and is associated with reduced TMEM216 expression.    Am J Hum Genet. 2024 Aug 20:S0002-9297(24)00281-7. doi: 10.1016/j.ajhg.2024.07.020. Online ahead of print. PMID: 39191256

 

Lyons PG, Dorr DA, Melton GB, Singh K, Payne PRO. Meeting the Artificial Intelligence Needs of U.S. Health Systems. Ann Intern Med. 2024 Aug 27. doi: 10.7326/ANNALS-24-00396. Online ahead of print. PMID: 39186786 No abstract available.

 

Gabriel RA, Curran BP, Swisher MW, Sztain JF, Tsuda PS, Said ET, Alexander B, Finneran JJ 4th, Abramson WB, Black JR, Wallace AM, Blair S, Donohue MC, Abdullah B, Xu NY, Cha BJ, Ilfeld BM. Paravertebral versus Pectoralis-II (Interpectoral and Pectoserratus) Nerve Blocks for Postoperative Analgesia after Non-Mastectomy Breast Surgery: A Randomized, Controlled, Observer-Masked Noninferiority Trial. Anesthesiology. 2024 Aug 26. doi: 10.1097/ALN.0000000000005207. Online ahead of print. PMID: 39186671

 

Shehab M, Alrashed F, Alsayegh A, Aldallal U, Ma C, Narula N, Jairath V, Singh S, Bessissow T. Comparative Efficacy of Biologics and Small Molecule in Ulcerative Colitis: A Systematic Review and Network Meta-analysis. Clin Gastroenterol Hepatol. 2024 Aug 23:S1542-3565(24)00767-5. doi: 10.1016/j.cgh.2024.07.033. Online ahead of print. PMID: 39182898

 

Satybaldiyeva N, Gamst A, Oren E, Park JY, Zhu SH. Secondhand smoke exposure and asthma status among adolescents: Findings from the 2019-2020 California Student Tobacco Survey. Prev Med Rep. 2024 Jul 27;45:102842. doi: 10.1016/j.pmedr.2024.102842. eCollection 2024 Sep. PMID: 39185324 Free PMC article.

 

Malka S, Biswas P, Berry AM, Sangermano R, Ullah M, Lin S, D'Antonio M, Jestin A, Jiao X, Quinodoz M, Sullivan L, Gardner JC, Place EM, Michaelides M, Kaminska K, Mahroo OA, Schiff E, Wright G, Cancellieri F, Vaclavik V, Santos C, Rehman AU, Mehrotra S, Azhar Baig HM, Iqbal M, Ansar M, Santos LC, Sousa AB, Tran VH, Matsui H, Bhatia A, Naeem MA, Akram SJ, Akram J, Riazuddin S, Ayuso C, Pierce EA, Hardcastle AJ, Riazuddin SA, Frazer KA, Hejtmancik JF, Rivolta C, Bujakowska KM, Arno G, Webster AR, Ayyagari R. Substitution of a single non-coding nucleotide upstream of TMEM216 causes non-syndromic retinitis pigmentosa and is associated with reduced TMEM216 expression. Am J Hum Genet. 2024 Aug 20:S0002-9297(24)00281-7. doi: 10.1016/j.ajhg.2024.07.020. Online ahead of print. PMID: 39191256

 

Talcott KE, Baxter SL, Chen DK, Korot E, Lee A, Kim JE, Modi Y, Moshfeghi DM, Singh RP. American Society of Retina Specialists Artificial Intelligence Task Force Report. J Vitreoretin Dis. 2024 Apr 20;8(4):373-380. doi: 10.1177/24741264241247602. eCollection 2024 Jul-Aug. PMID: 39148579

 

Mathews IT, Saminathan P, Henglin M, Liu M, Nadig N, Fang C, Mercader K, Chee SJ, Campbell AM, Patel AA, Tiwari S, Watrous JD, Ramesh K, Dicker M, Dao K, Meyer MA, Jousilahti P, Havulinna AS, Niiranen T, Salomaa V, Joosten LAB, Netea MG, Zheng P, Kronenberg M, Patel SP, Gutkind JS, Ottensmeier C, Long T, Kaech SM, Hedrick CC, Cheng S, Jain M, Sharma S. Linoleoyl-lysophosphatidylcholine suppresses immune-related adverse events due to immune checkpoint blockade.  medRxiv [Preprint]. 2024 Aug 8:2024.08.07.24310974. doi: 10.1101/2024.08.07.24310974. PMID: 39148854 Free PMC article. Preprint.

 

Pham D, Lomeli A, Goldhaber NH, Valentine HD, Knight R, Longhurst CA, Laurent LC, Jacobs MB. Longitudinal assessment of the impact of COVID-19 infection on mask-wearing behaviors. BMC Public Health. 2024 Aug 16;24(1):2230. doi: 10.1186/s12889-024-19776-0. PMID: 39152377 Free PMC article.

 

Haldeman PB, Harfouche C, Rosales R, Trimm C, Chun L, Reid C, Flint JH, Chiarappa F. Immediate and delayed flap reconstruction have equivalent outcomes and associated costs following soft tissue sarcoma surgery. J Surg Oncol. 2024 Aug 19. doi: 10.1002/jso.27770. Online ahead of print. PMID: 39155702

 

Kalaw FGP, Most J, Kako RN, Sharma P, Arias JD, Chen JS, Lin AC, Walker E, Bartsch DG, Baxter SL, Ferreyra H, Freeman WR, Borooah S. Retinal structural changes after cessation of pentosan polysulfate sodium. Retina. 2024 Jul 3. doi: 10.1097/IAE.0000000000004197. Online ahead of print. PMID: 39174300

 

Radgoudarzi N, Gregg C, Quackenbush Q, Yiu G, Freeby M, Su G, Baxter S, Thorne C, Willard-Grace R. Implementation Mapping of the Collaborative University of California Teleophthalmology Initiative (CUTI): A Qualitative Study Using the Exploration, Preparation, Implementation, and Sustainment (EPIS) Framework. Cureus. 2024 Jul 9;16(7):e64179. doi: 10.7759/cureus.64179. eCollection 2024 Jul. PMID: 39119397 Free PMC article.

 

Pham A, Edelson M, Nouri A, Kuo TT. Distributed management of patient data-sharing informed consents for clinical research. Comput Biol Med. 2024 Aug 8;180:108956. doi: 10.1016/j.compbiomed.2024.108956. Online ahead of print. PMID: 39121682

 

Acuff KN, Radha Saseendrakumar B, Weinreb RN, Baxter SL. Assessment of Missing Data on Glaucoma Severity among Participants in the NIH All of Us Research Program of the United States. J Glaucoma. 2024 Aug 13. doi: 10.1097/IJG.0000000000002480. Online ahead of print. PMID: 39133059

 

Heinke A, Radgoudarzi N, Huang BB, Baxter SL. A Review of Ophthalmology Education in the Era of Generative Artificial Intelligence. Asia Pac J Ophthalmol (Phila). 2024 Aug 10:100089. doi: 10.1016/j.apjo.2024.100089. Online ahead of print. PMID: 39134176 Review.

 

Shehab M, Hassan A, Alrashed F, Abbas A, Ma C, Narula N, Jairath V, Singh S, Bessissow T. Comparative Efficacy of Biologics and Small Molecule Therapies in Improving Patient-Reported Outcomes in Ulcerative Colitis: Systematic Review and Network Meta-Analysis. Inflamm Bowel Dis. 2024 Aug 13:izae163. doi: 10.1093/ibd/izae163. Online ahead of print. PMID: 39137239

 

Smith HS, Rubanovich CK, Robinson JO, Levchenko AN, Classen SA, Malek J, Buchanan AH, Biesecker B, Brothers KB, Wilfond BS, Rini C, Bloss CS, McGuire AL, Knight SJ. Measuring perceived utility of genomic sequencing: Development and validation of the GENEtic Utility (GENE-U) scale for adult screening. Genet Med. 2024 Aug 10:101240. doi: 10.1016/j.gim.2024.101240. Online ahead of print. PMID: 39140259

 

Fudman D, McConnell RA, Ha C, Singh S. Modern Advanced Therapies for Inflammatory Bowel Diseases: Practical Considerations and Positioning. Clin Gastroenterol Hepatol. 2024 Aug 13:S1542-3565(24)00728-6. doi: 10.1016/j.cgh.2024.06.050. Online ahead of print. PMID: 39147217 Review.

 

Hallaj S, Khawaja AP, Rodrigues IAS, Boland MV, Brown EN, Chen A, Stagg BC, Stein JD, Sun CQ, Mahe-Cook AL, Swaminathan SS, Wang SY, Xu BY, Weinreb RN, Baxter SL. Gap Analysis of Glaucoma Examination Concept Representations within Standard SNOMED Clinical Terms.Ophthalmol Glaucoma. 2024 Aug 13:S2589-4196(24)00140-6. doi: 10.1016/j.ogla.2024.08.001. Online ahead of print. PMID: 39147325

 

Ratwani RM, Classen D, Longhurst C. The Compelling Need for Shared Responsibility of AI Oversight: Lessons From Health IT Certification.JAMA. 2024 Aug 12. doi: 10.1001/jama.2024.12630. Online ahead of print. PMID: 39133493

 

McDaniels-Davidson C, Parada H Jr, Kasiri N, Patel SP, Strong D, Doran N. The association of perceived cannabis risks and benefits with cannabis use since cancer diagnosis.J Natl Cancer Inst Monogr. 2024 Aug 15;2024(66):244-251. doi: 10.1093/jncimonographs/lgad024. PMID: 39108239

 

Mohammadzadeh V, Liang Y, Moghimi S, Xie P, Nishida T, Mahmoudinezhad G, Eslani M, Walker E, Kamalipour A, Micheletti E, Wu JH, Christopher M, Zangwill LM, Javidi T, Weinreb RN. Detection of glaucoma progression on longitudinal series of en-face macular optical coherence tomography angiography images with a deep learning model. Br J Ophthalmol. 2024 Aug 7:bjo-2023-324528. doi: 10.1136/bjo-2023-324528. Online ahead of print. PMID: 39117359

 

Rojas-Carabali W, Agrawal R, Gutierrez-Sinisterra L, Baxter SL, Cifuentes-González C, Wei YC, Abisheganaden J, Kannapiran P, Wong S, Lee B, de-la-Torre A, Agrawal R. Natural Language Processing in medicine and ophthalmology: A review for the 21st-century clinician. Asia Pac J Ophthalmol (Phila). 2024 Jul 25:100084. doi: 10.1016/j.apjo.2024.100084. Online ahead of print. PMID: 39059557 Review.

 

Patel SP, Othus M, Chae YK, Huynh T, Tan B, Kuzel T, McLeod C, Lopez G, Chen HX, Sharon E, Streicher H, Ryan CW, Blanke C, Kurzrock R. Phase II basket trial of Dual Anti-CTLA-4 and Anti-PD-1 blockade in Rare Tumors (DART) SWOG S1609: adrenocortical carcinoma cohort. J Immunother Cancer. 2024 Jul 27;12(7):e009074. doi: 10.1136/jitc-2024-009074. PMID: 39067873 Free PMC article. Clinical Trial.

 

Leung C, Tahir W, Rosli Y, Lieber SB, Makris UE, Lee J, Ali H, Goulabchand R, Singh S, Singh N.Association Between Frailty Status and Readmissions in Hospitalized Patients With Systemic Lupus Erythematosus. ACR Open Rheumatol. 2024 Jul 29. doi: 10.1002/acr2.11722. Online ahead of print. PMID: 39074031

 

Sehgal A, Ziaei-Jam H, Shen A, Gymrek M. Genome-wide detection of somatic mosaicism at short tandem repeats. Bioinformatics. 2024 Jul 30:btae485. doi: 10.1093/bioinformatics/btae485. Online ahead of print. PMID: 39078205

 

Talwar JV, Klie A, Pagadala MS, Carter H. GRIEVOUS: Your command-line general for resolving cross-dataset genotype inconsistencies.Bioinformatics. 2024 Jul 30:btae489. doi:10.1093/bioinformatics/btae489. Online ahead of print. PMID: 39078222

 

Acuff KN, Villatoro GA, Baxter SL. Acute Bilateral Periorbital Edema in a Psychiatric Patient.JAMA Ophthalmol. 2024 Aug 1. doi: 10.1001/jamaophthalmol.2024.2815. Online ahead of print. PMID: 39088236

 

Pham D, Lomeli A, Goldhaber NH, Valentine HD, Knight R, Longhurst CA, Laurent LC, Jacobs MB.
 Longitudinal assessment of the impact of COVID-19 infection on mask-wearing behaviors. BMC Public Health. 2024 Aug 16;24(1):2230. doi: 10.1186/s12889-024-19776-0.  PMID: 39152377 Free PMC article.

 

Acuff KN, Radha Saseendrakumar B, Weinreb RN, Baxter SL.  Assessment of Missing Data on Glaucoma Severity among Participants in the NIH All of Us Research Program of the United States.  J Glaucoma. 2024 Aug 13. doi: 10.1097/IJG.0000000000002480. Online ahead of print. PMID: 39133059

Pham A, Edelson M, Nouri A, Kuo TT.  Distributed management of patient data-sharing informed consents for clinical research.  Comput Biol Med. 2024 Aug 8;180:108956. doi: 10.1016/j.compbiomed.2024.108956. Online ahead of print. PMID: 39121682

 

 Ratwani RM, Classen D, Longhurst C. The Compelling Need for Shared Responsibility of AI Oversight: Lessons From Health IT Certification.  JAMA. 2024 Aug 12. doi: 10.1001/jama.2024.12630. Online ahead of print. PMID: 39133493

 

Sadiq KO, Dobke MK, Boland BS, Lopez N, Eisenstein S. Autologous Fat Grafting For Perianal Fistula in Behçet's Disease: A Case Report.Inflamm Bowel Dis. 2024 Jul 20:izae157. doi: 10.1093/ibd/izae157. Online ahead of print. PMID: 39031965

 

Patel SH, Rudolf F, Schwartz K, Gabriel RA, Hastings RH, Daniel M, Suresh PJ. Enhancing Laryngoscopy Mastery: The Impact of Autonomous Practice with Feedback-Providing Simulators.A A Pract. 2024 Jul 22;18(7):e01825. doi: 10.1213/XAA.0000000000001825. eCollection 2024 Jul 1. PMID: 39037074

Jin Q, Chen F, Zhou Y, Xu Z, Cheung JM, Chen R, Summers RM, Rousseau JF, Ni P, Landsman MJ, Baxter SL, Al'Aref SJ, Li Y, Chen A, Brejt JA, Chiang MF, Peng Y, Lu Z. Hidden flaws behind expert-level accuracy of multimodal GPT-4 vision in medicine. NPJ Digit Med. 2024 Jul 23;7(1):190. doi: 10.1038/s41746-024-01185-7. PMID: 39043988 

 

Systrom HK, Rai V, Singh S, Baidoo L, Cheifetz AS, Devlin SM, Gecse KB, Irving PM, Kaplan GG, Kozuch PL, Ullman T, Sparrow MP, Melmed GY, Siegel CA. When Perfect Is the Enemy of Good: Results of a RAND Appropriateness Panel on Treat to Target in Asymptomatic IBD. Am J Gastroenterol. 2024 Jul 15. doi: 10.14309/ajg.0000000000002964. Online ahead of print. PMID: 39008539

 

Rudolf F, Oyama LC, El-Kareh R. Impact of an automated patient outcome feedback system on emergency medicine resident patient follow-up: An interrupted time series analysis.  AEM Educ Train. 2024 Jul 4;8(4):e11011. doi: 10.1002/aet2.11011. eCollection 2024 Aug. PMID: 38974783

Gabriel RA, Seng EC, Curran BP, Winston P, Trescot AM, Filipovski I. A Narrative Review of Ultrasound-Guided and Landmark-based Percutaneous Cryoneurolysis for the Management of Acute and Chronic Pain.Curr Pain Headache Rep. 2024 Jul 4. doi: 10.1007/s11916-024-01281-z. Online ahead of print. PMID: 38963513 Review.

 

Shepard RM, Ghebremedhin A, Pratumchai I, Robinson SR, Betts C, Hu J, Sasik R, Fisch KM, Zak J, Chen H, Paradise M, Rivera J, Amjad M, Uchiyama S, Seo H, Campos AD, Dayao DA, Tzipori S, Piedra-Mora C, Das S, Hasteh F, Russo H, Sun X, Xu L, E Alexander LC, Duran JM, Odish M, Pretorius V, Kirchberger NC, Chin SM, Von Schalscha T, Cheresh D, Morrey JD, Alargova R, O'Connell B, Martinot TA, Patel SP, Nizet V, Martinot AJ, Coussens LM, Teijaro JR, Varner JA.PI3Kγ inhibition circumvents inflammation and vascular leak in SARS-CoV-2 and other infections.Sci Transl Med. 2024 Jul 3;16(754):eadi6887. doi: 10.1126/scitranslmed.adi6887. Epub 2024 Jul 3. PMID: 38959328

 

Ozturk K, Panwala R, Sheen J, Ford K, Jayne N, Portell A, Zhang DE, Hutter S, Haferlach T, Ideker T, Mali P, Carter H. Interface-guided phenotyping of coding variants in the transcription factor RUNX1. Cell Rep. 2024 Jul 4;43(7):114436. doi: 10.1016/j.celrep.2024.114436. Online ahead of print. PMID: 38968069

 

Ziaei Jam H, Zook JM, Javadzadeh S, Park J, Sehgal A, Gymrek M. LongTR: genome-wide profiling of genetic variation at tandem repeats from long reads. Genome Biol. 2024 Jul 4;25(1):176. doi: 10.1186/s13059-024-03319-2. PMID: 38965568 Free PMC article.

 

Yaseen F, Taj M, Ravindran R, Zaffar F, Luciw PA, Ikram A, Zafar SI, Gill T, Hogarth M, Khan IH. An exploratory deep learning approach to investigate tuberculosis pathogenesis in nonhuman primate model: Combining automated radiological analysis with clinical and biomarkers data. J Med Primatol. 2024 Aug;53(4):e12722. doi: 10.1111/jmp.12722.  PMID: 38949157

 

Wu JH, Halfpenny W, Bu J, Brar M, Weinreb RN, Baxter SL. Social factors associated with the risk of glaucoma suspect conversion to glaucoma: analysis of the nationwide All of Us Program. 
Ophthalmol Glaucoma. 2024 Jul 1:S2589-4196(24)00102-9. doi: 10.1016/j.ogla.2024.06.007. Online ahead of print.  PMID: 38959998

 

Study: AI Surveillance Tool Successfully Helps to Predict Sepsis, Saves Lives, UC San Diego Today, 2024, Jan 23.

Unsubscribe

 

This email was sent to m1triplett@ucsd.edu.

To continue receiving our emails, add us to your address book.

 

9500 Gilman Drive | La Jolla, CA 92093 US

Copyright 2024 UCSD DBMI. All rights reserved.